EnhancerDB
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  3. rs12566809[chr1:15508698]
Enhancers that have rs12566809[chr1:15508698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12566809[chr1:15508698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15508683 15508698 FOXA1 JASPAR yes 26967937
chr1 15508683 15508699 POU4F2 JASPAR yes 26967938
chr1 15508683 15508699 POU4F3 JASPAR yes 26967939
chr1 15508686 15508700 ONECUT2 JASPAR yes 26967945
chr1 15508686 15508700 ONECUT3 JASPAR yes 26967946
chr1 15508686 15508701 FOXP1 JASPAR yes 26967947
chr1 15508686 15508701 HNF1A JASPAR yes 26967948
chr1 15508687 15508701 POU4F1 JASPAR yes 26967949
chr1 15508687 15508702 FOXA1 JASPAR yes 26967950
chr1 15508687 15508703 POU4F2 JASPAR yes 26967951
chr1 15508687 15508703 POU4F3 JASPAR yes 26967952
chr1 15508688 15508699 FOXB1 JASPAR yes 26967953
chr1 15508688 15508699 FOXC1 JASPAR yes 26967954
chr1 15508688 15508699 PROP1 JASPAR yes 26967955
chr1 15508688 15508700 FOXC2 JASPAR yes 26967956
chr1 15508689 15508701 FOXI1 JASPAR yes 26967957
chr1 15508690 15508704 ONECUT2 JASPAR yes 26967958
chr1 15508690 15508704 ONECUT3 JASPAR yes 26967959
chr1 15508690 15508705 HNF1A JASPAR yes 26967960
chr1 15508691 15508704 HNF1B JASPAR yes 26967961
chr1 15508691 15508705 POU4F1 JASPAR yes 26967962
chr1 15508691 15508706 FOXA1 JASPAR yes 26967963
chr1 15508691 15508707 POU4F3 JASPAR yes 26967964
chr1 15508692 15508703 FOXB1 JASPAR yes 26967965
chr1 15508692 15508703 FOXC1 JASPAR yes 26967966
chr1 15508692 15508703 PROP1 JASPAR yes 26967967
chr1 15508692 15508704 FOXC2 JASPAR yes 26967968
chr1 15508693 15508705 FOXI1 JASPAR yes 26967969
Genes associated with rs12566809[chr1:15508698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More