EnhancerDB
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  3. rs12578006[chr11:68890034]
Enhancers that have rs12578006[chr11:68890034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 68880405 68893875 enh47499
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Stomach Muscle (A673) Thyroid Breast Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs12578006[chr11:68890034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 68889460 68892193 ZNF143 GTRD no Epithelial (MCF-7) 21498673
chr11 68889535 68891166 ZNF143 GTRD no Epithelial (MCF-7) 21498674
chr11 68889626 68891121 ZNF143 GTRD no Epithelial (MCF-7) 21498675
chr11 68889762 68890944 ZNF143 GTRD no Epithelial (MCF-7) 21498676
chr11 68889767 68890801 ZNF274 GTRD no Cervix (HeLa-S3) 21498677
chr11 68889833 68890443 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21498678
chr11 68889880 68891011 ZNF143 GTRD no Epithelial (MCF-7) 21498679
chr11 68889896 68891242 ZNF143 GTRD no Epithelial (MCF-7) 21498680
chr11 68889908 68891723 ZNF143 GTRD no Epithelial (MCF-7) 21498681
chr11 68889914 68891076 ZNF143 GTRD no Epithelial (MCF-7) 21498682
chr11 68889952 68890709 ZNF143 GTRD no Epithelial (MCF-7) 21498683
chr11 68889961 68891897 ZNF143 GTRD no Epithelial (MCF-7) 21498684
chr11 68889971 68890762 ZNF143 GTRD no Epithelial (MCF-7) 21498685
chr11 68889992 68891074 ZNF143 GTRD no Epithelial (MCF-7) 21498686
chr11 68890003 68891135 ZNF143 GTRD no Epithelial (MCF-7) 21498687
chr11 68890027 68890037 GABPA JASPAR yes 39504517
chr11 68890029 68890035 ETS1 JASPAR yes 39504518
chr11 68890029 68890035 SPI1 JASPAR yes 39504519
chr11 68890029 68890039 ELK1 JASPAR yes 39504520
chr11 68890029 68890709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21498688
Genes associated with rs12578006[chr11:68890034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More