EnhancerDB
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  3. rs12588156[chr14:50388702]
Enhancers that have rs12588156[chr14:50388702]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50362765 50389315 enh3174
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12588156[chr14:50388702]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50388127 50389104 TCF7L2 GTRD no Colon (HCT116) 21615624
chr14 50388353 50388755 ZNF143 GTRD no Epithelial (MCF-7) 21615625
chr14 50388682 50388703 IRF1 JASPAR yes 115209352
chr14 50388688 50388709 IRF1 JASPAR yes 115209353
chr14 50388692 50388704 IRF1 JASPAR yes 115209354
Genes associated with rs12588156[chr14:50388702], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More