EnhancerDB
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  3. rs12589930[chr14:105566683]
Enhancers that have rs12589930[chr14:105566683]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 105549318 105571095 enh15987
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12589930[chr14:105566683]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 105566676 105566696 RREB1 JASPAR yes 118074536
chr14 105566676 105566697 IRF1 JASPAR yes 118074537
chr14 105566677 105566698 IRF1 JASPAR yes 118074538
chr14 105566678 105566693 STAT2 JASPAR yes 118074539
chr14 105566681 105566693 IRF1 JASPAR yes 118074540
chr14 105566681 105566695 IRF7 JASPAR yes 118074541
chr14 105566682 105566702 RREB1 JASPAR yes 118074542
chr14 105566682 105566703 IRF1 JASPAR yes 118074543
chr14 105566683 105566689 TCF4 TRANSFAC yes 118074544
chr14 105566683 105566698 FOXP1 JASPAR yes 118074545
chr14 105566683 105566704 IRF1 JASPAR yes 118074546
Genes associated with rs12589930[chr14:105566683], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More