EnhancerDB
  1. Home
  2. SNP
  3. rs12590380[chr14:50388094]
Enhancers that have rs12590380[chr14:50388094]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50362765 50389315 enh3174
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12590380[chr14:50388094]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50388087 50388101 PAX6 JASPAR yes 115209241
chr14 50388087 50388106 PAX5 JASPAR yes 115209242
Genes associated with rs12590380[chr14:50388094], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More