EnhancerDB
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  3. rs12596452[chr16:85436087]
Enhancers that have rs12596452[chr16:85436087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85422125 85439595 enh4173
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs12596452[chr16:85436087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85434436 85437321 TCF7L2 GTRD no Colon (HCT116) 21725068
chr16 85434536 85436196 TCF7L2 GTRD no Colon (HCT116) 21725072
chr16 85434673 85441574 ZNF143 GTRD no Epithelial (MCF-7) 21725074
chr16 85434683 85438585 TCF7L2 GTRD no Colon (HCT116) 21725075
chr16 85435536 85441658 ZNF143 GTRD no Epithelial (MCF-7) 21725077
chr16 85435570 85443981 ZNF143 GTRD no Epithelial (MCF-7) 21725078
chr16 85435585 85438727 ZNF143 GTRD no Epithelial (MCF-7) 21725079
chr16 85435696 85438216 ZNF274 GTRD no Bone Marrow (K562) 21725081
chr16 85435698 85438347 ZNF143 GTRD no Epithelial (MCF-7) 21725082
chr16 85435745 85436910 ZNF274 GTRD no Bone Marrow (K562) 21725083
chr16 85435751 85437969 ZNF274 GTRD no Bone Marrow (K562) 21725084
chr16 85435755 85438314 ZNF274 GTRD no Bone Marrow (K562) 21725085
chr16 85435862 85438410 ZNF143 GTRD no Epithelial (MCF-7) 21725086
chr16 85435880 85438319 ZNF143 GTRD no Epithelial (MCF-7) 21725087
chr16 85435896 85438245 ZNF143 GTRD no Epithelial (MCF-7) 21725088
chr16 85435912 85438277 ZNF143 GTRD no Epithelial (MCF-7) 21725089
chr16 85435983 85438152 ZNF143 GTRD no Epithelial (MCF-7) 21725090
chr16 85435996 85440319 ZNF143 GTRD no Epithelial (MCF-7) 21725091
chr16 85436007 85438128 ZNF143 GTRD no Epithelial (MCF-7) 21725092
chr16 85436035 85438192 ZNF143 GTRD no Epithelial (MCF-7) 21725093
chr16 85436044 85438094 ZNF143 GTRD no Epithelial (MCF-7) 21725094
chr16 85436052 85438014 ZNF143 GTRD no Epithelial (MCF-7) 21725095
chr16 85436070 85438127 ZNF143 GTRD no Epithelial (MCF-7) 21725096
Genes associated with rs12596452[chr16:85436087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More