EnhancerDB
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  3. rs12597006[chr16:377090]
Enhancers that have rs12597006[chr16:377090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs12597006[chr16:377090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 21683846
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 108170225
chr16 376036 377701 ZNF143 GTRD no Epithelial (MCF-7) 21683847
chr16 376036 377701 ZNF143 GTRD no Epithelial (MCF-7) 108170226
chr16 376766 377557 TCF7L2 GTRD no Colon (HCT116) 21683848
chr16 376766 377557 TCF7L2 GTRD no Colon (HCT116) 108170227
chr16 377032 377682 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21683849
chr16 377032 377682 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108170228
chr16 377070 377640 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21683850
chr16 377070 377640 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108170229
chr16 377073 377914 ZNF143 GTRD no Epithelial (MCF-7) 21683851
chr16 377073 377914 ZNF143 GTRD no Epithelial (MCF-7) 108170230
chr16 377082 377742 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21683852
chr16 377082 377742 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108170231
Genes associated with rs12597006[chr16:377090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More