EnhancerDB
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  3. rs12600035[chr16:88294336]
Enhancers that have rs12600035[chr16:88294336]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs12600035[chr16:88294336]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88294334 88294343 PITX3 JASPAR yes 12271249
chr16 88294334 88294344 GSC2 JASPAR yes 12271250
chr16 88294334 88294344 GSC JASPAR yes 12271251
chr16 88294335 88294343 OTX1 JASPAR yes 12271252
Genes associated with rs12600035[chr16:88294336], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More