EnhancerDB
  1. Home
  2. SNP
  3. rs12600557[chr17:76944790]
Enhancers that have rs12600557[chr17:76944790]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs12600557[chr17:76944790]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76943259 76945299 TCF7L2 GTRD no Colon (HCT116) 21795477
chr17 76943564 76945284 TCF7L2 GTRD no Colon (HCT116) 21795479
chr17 76944329 76945065 TCF7L2 GTRD no Colon (HCT116) 21795493
chr17 76944788 76944799 CEBPB JASPAR yes 56192285
chr17 76944789 76944802 NFKB1 JASPAR yes 56192286
chr17 76944789 76944802 NFKB2 JASPAR yes 56192287
Genes associated with rs12600557[chr17:76944790], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More