EnhancerDB
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  3. rs12600858[chr17:57504920]
Enhancers that have rs12600858[chr17:57504920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57488685 57509755 enh17259
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Heart
chr17 57504897 57505104 vista25328
VISTA
Transcript factors that have rs12600858[chr17:57504920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57504713 57504949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275997
chr17 57504876 57505232 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21775028
chr17 57504876 57505232 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108275998
chr17 57504909 57504921 GLI2 JASPAR yes 21264263
chr17 57504909 57504921 GLI2 JASPAR yes 55058987
chr17 57504910 57504922 ZBTB7A JASPAR yes 21264264
chr17 57504910 57504922 ZBTB7A JASPAR yes 55058988
Genes associated with rs12600858[chr17:57504920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More