EnhancerDB
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Enhancers that have rs12601688[chr17:79695225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12601688[chr17:79695225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79694572 79696980 TCF7L2 GTRD no Colon (HCT116) 21798278
chr17 79694592 79695537 ZNF143 GTRD no Epithelial (MCF-7) 21798279
chr17 79694600 79695493 ZNF143 GTRD no Epithelial (MCF-7) 21798280
chr17 79694606 79697345 TCF7L2 GTRD no Colon (HCT116) 21798281
chr17 79694625 79696438 ZNF143 GTRD no Epithelial (MCF-7) 21798282
chr17 79694658 79696965 TCF7L2 GTRD no Colon (HCT116) 21798284
chr17 79694777 79695427 TCF7L2 GTRD no Colon (HCT116) 21798288
chr17 79694808 79696000 TCF7L2 GTRD no Colon (HCT116) 21798289
chr17 79694870 79695889 TCF7L2 GTRD no Colon (HCT116) 21798290
chr17 79694982 79695302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798291
chr17 79695017 79695277 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798292
chr17 79695114 79696462 ZNF143 GTRD no Epithelial (MCF-7) 21798293
Genes associated with rs12601688[chr17:79695225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More