EnhancerDB
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  3. rs12602466[chr17:40511946]
Enhancers that have rs12602466[chr17:40511946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40510425 40522535 enh17159
Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Thyroid Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs12602466[chr17:40511946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40511943 40511948 SP1 TRANSFAC yes 54297983
chr17 40511943 40511952 HIC2 JASPAR yes 54297984
chr17 40511946 40511950 LFA1 TRANSFAC yes 54297985
Genes associated with rs12602466[chr17:40511946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More