EnhancerDB
  1. Home
  2. SNP
  3. rs12602879[chr17:4133394]
Enhancers that have rs12602879[chr17:4133394]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4130913 4138615 enh16936
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Blood (T-cell) Bone (Osteoblast) Lung (PC-9) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs12602879[chr17:4133394]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4133389 4133401 TAL1 JASPAR yes 52821326
chr17 4133389 4133402 ZBTB18 JASPAR yes 52821327
chr17 4133391 4133401 MYF6 JASPAR yes 52821328
chr17 4133391 4133401 NEUROG2 JASPAR yes 52821329
chr17 4133391 4133401 OLIG1 JASPAR yes 52821330
chr17 4133391 4133401 OLIG3 JASPAR yes 52821331
chr17 4133391 4133403 TAL1 JASPAR yes 52821332
Genes associated with rs12602879[chr17:4133394], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More