EnhancerDB
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  3. rs12604778[chr18:56232719]
Enhancers that have rs12604778[chr18:56232719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12604778[chr18:56232719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56232169 56232765 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824220
chr18 56232169 56232765 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338494
chr18 56232709 56232720 CEBPA JASPAR yes 110960117
chr18 56232710 56232720 CEBPG JASPAR yes 110960118
chr18 56232716 56232729 SCRT2 JASPAR yes 110960119
Genes associated with rs12604778[chr18:56232719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More