EnhancerDB
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  3. rs12608488[chr19:14475773]
Enhancers that have rs12608488[chr19:14475773]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12608488[chr19:14475773]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 21853187
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391247
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391248
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 21853193
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 108391249
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 108391250
chr19 14471468 14477141 ZNF274 GTRD no Blood (GM12878) 108391257
chr19 14471468 14477141 ZNF274 GTRD no Blood (GM12878) 108391258
chr19 14473264 14476068 TCF7L2 GTRD no Colon (HCT116) 21853288
chr19 14473264 14476068 TCF7L2 GTRD no Colon (HCT116) 108391271
chr19 14473264 14476068 TCF7L2 GTRD no Colon (HCT116) 108391272
chr19 14474188 14477396 ZNF274 GTRD no Cervix (HeLa-S3) 21853292
chr19 14474188 14477396 ZNF274 GTRD no Cervix (HeLa-S3) 108391286
chr19 14474270 14475954 ZBTB33 GTRD no Lung (A549) 108391289
chr19 14474510 14477703 TCF7L2 GTRD no Colon (HCT116) 21853317
chr19 14474573 14477435 ZNF143 GTRD no Epithelial (MCF-7) 21853320
chr19 14474739 14475916 ZNF274 GTRD no Bone Marrow (K562) 21853323
chr19 14474742 14476042 TCF7L2 GTRD no Colon (HCT116) 21853324
chr19 14474770 14477079 ZNF274 GTRD no Bone Marrow (K562) 21853325
chr19 14474787 14476135 ZNF274 GTRD no Bone Marrow (K562) 21853327
chr19 14474895 14475872 ZNF274 GTRD no Bone Marrow (K562) 21853330
chr19 14474906 14475852 TCF7L2 GTRD no Colon (HCT116) 21853332
chr19 14474907 14478714 ZNF274 GTRD no Bone Marrow (K562) 21853333
chr19 14474944 14475908 TCF7L2 GTRD no Colon (HCT116) 21853335
chr19 14474959 14476209 ZNF274 GTRD no Bone Marrow (K562) 21853337
chr19 14474975 14475785 ZNF274 GTRD no Bone Marrow (K562) 21853339
chr19 14474994 14475849 ZNF274 GTRD no Bone Marrow (K562) 21853341
chr19 14474995 14476250 TCF7L2 GTRD no Colon (HCT116) 21853342
chr19 14475025 14475867 ZNF274 GTRD no Bone Marrow (K562) 21853344
chr19 14475036 14476265 ZNF274 GTRD no Bone Marrow (K562) 21853346
chr19 14475038 14475782 ZNF274 GTRD no Bone Marrow (K562) 21853347
chr19 14475120 14475782 ZNF274 GTRD no Bone Marrow (K562) 21853353
chr19 14475152 14476346 ZNF274 GTRD no Bone Marrow (K562) 21853356
chr19 14475181 14476033 ZNF274 GTRD no Bone Marrow (K562) 21853358
chr19 14475195 14475863 ZNF274 GTRD no Bone Marrow (K562) 21853362
chr19 14475348 14475775 ZNF274 GTRD no Bone Marrow (K562) 21853369
chr19 14475423 14475867 ZNF274 GTRD no Bone Marrow (K562) 21853370
chr19 14475511 14475831 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21853371
chr19 14475512 14475792 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21853372
chr19 14475619 14477378 ZNF143 GTRD no Epithelial (MCF-7) 21853373
chr19 14475639 14477461 AR GTRD no Prostate (PC-3) 21853374
chr19 14475644 14476440 ZNF143 GTRD no Epithelial (MCF-7) 21853375
chr19 14475733 14476356 ZNF143 GTRD no Epithelial (MCF-7) 21853376
chr19 14475745 14475995 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21853377
chr19 14475764 14475785 ZNF263 JASPAR yes 112566204
chr19 14475766 14475779 SMAD2 JASPAR yes 112566205
chr19 14475772 14475785 ELF1 JASPAR yes 112566206
Genes associated with rs12608488[chr19:14475773], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More