EnhancerDB
  1. Home
  2. SNP
  3. rs12611258[chr19:3338892]
Enhancers that have rs12611258[chr19:3338892]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs12611258[chr19:3338892]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3338351 3339206 ZNF274 GTRD no Cervix (HeLa-S3) 21838722
chr19 3338351 3339206 ZNF274 GTRD no Cervix (HeLa-S3) 108365454
chr19 3338391 3339062 ZNF274 GTRD no Blood (GM12878) 108365455
chr19 3338392 3338940 ZNF274 GTRD no Blood (GM12878) 108365456
chr19 3338400 3338906 ZNF274 GTRD no Blood (GM12878) 108365457
chr19 3338403 3339081 ZNF274 GTRD no Cervix (HeLa-S3) 21838723
chr19 3338403 3339081 ZNF274 GTRD no Cervix (HeLa-S3) 108365458
chr19 3338436 3339015 TCF7L2 GTRD no Colon (HCT116) 21838725
chr19 3338436 3339015 TCF7L2 GTRD no Colon (HCT116) 108365461
chr19 3338443 3339088 ZBTB33 GTRD no Lung (A549) 108365462
chr19 3338477 3338965 ZNF143 GTRD no Epithelial (MCF-7) 108365463
chr19 3338493 3339143 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21838726
chr19 3338493 3339143 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108365464
chr19 3338524 3339087 ZNF143 GTRD no Epithelial (MCF-7) 108365466
chr19 3338533 3339227 TCF7L2 GTRD no Colon (HCT116) 21838727
chr19 3338533 3339227 TCF7L2 GTRD no Colon (HCT116) 108365467
chr19 3338538 3339008 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108365468
chr19 3338573 3338926 ZNF274 GTRD no Cervix (HeLa-S3) 21838728
chr19 3338573 3338926 ZNF274 GTRD no Cervix (HeLa-S3) 108365469
chr19 3338644 3339113 ZNF143 GTRD no Epithelial (MCF-7) 108365471
chr19 3338663 3339016 ZNF274 GTRD no Cervix (HeLa-S3) 21838730
chr19 3338663 3339016 ZNF274 GTRD no Cervix (HeLa-S3) 108365472
chr19 3338665 3338989 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108365473
chr19 3338690 3339230 ZNF274 GTRD no Cervix (HeLa-S3) 21838731
chr19 3338690 3339230 ZNF274 GTRD no Cervix (HeLa-S3) 108365474
chr19 3338741 3339422 ZNF274 GTRD no Bone Marrow (K562) 108365475
chr19 3338749 3339386 ZNF274 GTRD no Liver (HepG2) 108365476
chr19 3338763 3339260 ZNF143 GTRD no Epithelial (MCF-7) 108365477
chr19 3338770 3339229 ZNF274 GTRD no Blood (GM12878) 108365478
chr19 3338776 3339354 ZNF143 GTRD no Epithelial (MCF-7) 108365479
chr19 3338790 3339218 ZNF274 GTRD no Liver (HepG2) 108365480
chr19 3338791 3339402 ZNF274 GTRD no Liver (HepG2) 108365481
chr19 3338798 3339220 ZNF274 GTRD no Blood (GM12878) 108365482
chr19 3338878 3338893 TFAP2C JASPAR yes 112120892
chr19 3338880 3338897 RARA JASPAR yes 112120893
Genes associated with rs12611258[chr19:3338892], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More