EnhancerDB
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  3. rs12719790[chr16:1328598]
Enhancers that have rs12719790[chr16:1328598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12719790[chr16:1328598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1327777 1328621 TCF7L2 GTRD no Colon (HCT116) 21684406
chr16 1328587 1329138 TCF7L2 GTRD no Colon (HCT116) 21684407
Genes associated with rs12719790[chr16:1328598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 1961464 1968441 - HS3ST6 ENSG00000162040.5 1968441 632866 Lung 0.0170026 14408