EnhancerDB
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  3. rs12724159[chr1:27036128]
Enhancers that have rs12724159[chr1:27036128]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27017585 27036395 enh166
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Epithelial (MCF-7) Stomach Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12724159[chr1:27036128]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27036111 27036132 IRF1 JASPAR yes 27651277
chr1 27036113 27036134 IRF1 JASPAR yes 27651278
chr1 27036114 27036135 IRF1 JASPAR yes 27651279
chr1 27036115 27036136 IRF1 JASPAR yes 27651280
chr1 27036116 27036131 FOXP1 JASPAR yes 27651281
chr1 27036116 27036137 IRF1 JASPAR yes 27651282
chr1 27036117 27036132 FOXP1 JASPAR yes 27651283
chr1 27036117 27036138 IRF1 JASPAR yes 27651284
chr1 27036118 27036133 FOXP1 JASPAR yes 27651285
chr1 27036118 27036139 IRF1 JASPAR yes 27651286
chr1 27036119 27036134 FOXP1 JASPAR yes 27651287
chr1 27036120 27036135 FOXP1 JASPAR yes 27651288
chr1 27036121 27036136 FOXP1 JASPAR yes 27651289
chr1 27036122 27036137 FOXP1 JASPAR yes 27651290
chr1 27036123 27036138 FOXP1 JASPAR yes 27651291
chr1 27036124 27036139 FOXP1 JASPAR yes 27651292
chr1 27036125 27036140 FOXP1 JASPAR yes 27651293
chr1 27036126 27036141 FOXP1 JASPAR yes 27651294
chr1 27036128 27036143 MEF2C JASPAR yes 27651295
Genes associated with rs12724159[chr1:27036128], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More