EnhancerDB
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  3. rs12724599[chr1:202045541]
Enhancers that have rs12724599[chr1:202045541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12724599[chr1:202045541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 21366478
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 107857652
chr1 202044334 202047849 ZNF143 GTRD no Epithelial (MCF-7) 21366482
chr1 202044334 202047849 ZNF143 GTRD no Epithelial (MCF-7) 107857653
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 21366484
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 107857654
chr1 202044994 202045570 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366486
chr1 202044994 202045570 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857655
chr1 202045002 202045552 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366487
chr1 202045002 202045552 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857656
chr1 202045047 202045720 GATA1 UCSC Txn Factor no Conserved 107857658
chr1 202045055 202045631 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366489
chr1 202045055 202045631 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857659
chr1 202045101 202045852 TCF7L2 UCSC Txn Factor no Conserved 107857660
chr1 202045111 202045567 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366490
chr1 202045111 202045567 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857661
chr1 202045127 202045623 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366491
chr1 202045127 202045623 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857662
chr1 202045152 202045628 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366492
chr1 202045152 202045628 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857663
chr1 202045160 202045544 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366493
chr1 202045160 202045544 RCOR1 UCSC Txn Factor no Conserved 107857664
chr1 202045160 202045544 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857665
chr1 202045172 202045587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366494
chr1 202045172 202045587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857666
chr1 202045176 202045566 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366495
chr1 202045176 202045566 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857667
chr1 202045193 202045553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366498
chr1 202045193 202045553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857670
chr1 202045204 202045574 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366500
chr1 202045204 202045574 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857672
chr1 202045207 202045583 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366501
chr1 202045207 202045583 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857673
chr1 202045210 202045570 GATA2 UCSC Txn Factor no Conserved 107857675
chr1 202045211 202045541 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366503
chr1 202045211 202045541 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857676
chr1 202045211 202045607 EP300 UCSC Txn Factor no Conserved 107857677
chr1 202045215 202045565 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366505
chr1 202045215 202045565 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857679
chr1 202045220 202045544 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366509
chr1 202045220 202045544 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857684
chr1 202045220 202045556 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366510
chr1 202045220 202045556 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857685
chr1 202045223 202045563 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366513
chr1 202045223 202045563 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857688
chr1 202045223 202045607 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366514
chr1 202045223 202045607 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857689
chr1 202045227 202045557 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366516
chr1 202045227 202045557 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857691
chr1 202045273 202048470 ZNF143 GTRD no Epithelial (MCF-7) 21366526
chr1 202045273 202048470 ZNF143 GTRD no Epithelial (MCF-7) 107857704
chr1 202045278 202048203 ZNF274 GTRD no Cervix (HeLa-S3) 21366527
chr1 202045278 202048203 ZNF274 GTRD no Cervix (HeLa-S3) 107857705
chr1 202045348 202045852 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366532
chr1 202045348 202045852 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857712
chr1 202045367 202048492 ZNF143 GTRD no Epithelial (MCF-7) 21366533
chr1 202045367 202048492 ZNF143 GTRD no Epithelial (MCF-7) 107857713
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 21366534
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 107857714
chr1 202045446 202048007 ZBTB33 GTRD no Lung (A549) 107857715
chr1 202045472 202047211 ZNF143 GTRD no Epithelial (MCF-7) 21366535
chr1 202045472 202047211 ZNF143 GTRD no Epithelial (MCF-7) 107857716
chr1 202045486 202047915 ZNF143 GTRD no Epithelial (MCF-7) 21366536
chr1 202045486 202047915 ZNF143 GTRD no Epithelial (MCF-7) 107857717
chr1 202045496 202047588 ZNF143 GTRD no Epithelial (MCF-7) 21366537
chr1 202045496 202047588 ZNF143 GTRD no Epithelial (MCF-7) 107857718
chr1 202045513 202048075 ZNF143 GTRD no Epithelial (MCF-7) 21366538
chr1 202045513 202048075 ZNF143 GTRD no Epithelial (MCF-7) 107857719
chr1 202045531 202045546 ZBTB33 JASPAR yes 34550203
chr1 202045541 202047565 ZNF143 GTRD no Epithelial (MCF-7) 21366539
Genes associated with rs12724599[chr1:202045541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More