EnhancerDB
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  3. rs12729948[chr1:172504106]
Enhancers that have rs12729948[chr1:172504106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172503525 172518495 enh728
Prostate (PC-3) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Stomach
Transcript factors that have rs12729948[chr1:172504106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172501367 172507799 ZNF274 GTRD no Bone Marrow (K562) 107845854
chr1 172504096 172504111 MEF2C JASPAR yes 33135055
chr1 172504102 172504117 HNF1A JASPAR yes 33135056
Genes associated with rs12729948[chr1:172504106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More