EnhancerDB
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  3. rs12731646[chr1:169090660]
Enhancers that have rs12731646[chr1:169090660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169076205 169091718 enh12359
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs12731646[chr1:169090660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169090655 169090668 SMAD2 JASPAR yes 32985011
chr1 169090660 169090672 HES5 JASPAR yes 32985012
chr1 169090660 169090672 PKNOX1 JASPAR yes 32985013
chr1 169090660 169090672 PKNOX2 JASPAR yes 32985014
chr1 169090660 169090672 TGIF1 JASPAR yes 32985015
chr1 169090660 169090672 TGIF2 JASPAR yes 32985016
Genes associated with rs12731646[chr1:169090660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More