EnhancerDB
  1. Home
  2. SNP
  3. rs12733996[chr1:228973697]
Enhancers that have rs12733996[chr1:228973697]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs12733996[chr1:228973697]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228973020 228974092 POLR2A UCSC Txn Factor no Conserved 107877499
chr1 228973570 228974030 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388862
chr1 228973570 228974030 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877500
chr1 228973616 228973864 ZNF274 GTRD no Bone Marrow (K562) 107877501
chr1 228973626 228974037 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388863
chr1 228973626 228974037 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877502
chr1 228973684 228974084 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388864
chr1 228973684 228974084 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877503
chr1 228973685 228973887 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388865
chr1 228973685 228973887 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877504
chr1 228973686 228973697 FOXA1 JASPAR yes 35934206
chr1 228973688 228973948 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388866
chr1 228973688 228973948 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877505
Genes associated with rs12733996[chr1:228973697], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More