EnhancerDB
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  3. rs12754113[chr1:167241311]
Enhancers that have rs12754113[chr1:167241311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs12754113[chr1:167241311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167241298 167241312 FOXF2 JASPAR yes 32856522
chr1 167241303 167241311 FOXG1 JASPAR yes 32856526
chr1 167241306 167241321 SOX21 JASPAR yes 32856527
Genes associated with rs12754113[chr1:167241311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More