EnhancerDB
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  3. rs12800234[chr11:122040732]
Enhancers that have rs12800234[chr11:122040732]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122022545 122046395 enh47532
Prostate (PC-3) Prostate (RWPE1) Esophagus Thyroid Peripheral Blood (MM.1S) Uterus Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Thymus
Transcript factors that have rs12800234[chr11:122040732]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122040455 122040753 SOX2 GTRD no Neural Stem Cells (H9) 21519423
chr11 122040476 122040981 SOX2 GTRD no Neural Stem Cells (H9) 21519424
chr11 122040506 122040742 SOX2 GTRD no Neural Stem Cells (H9) 21519425
chr11 122040538 122040797 SOX2 GTRD no Neural Stem Cells (H9) 21519426
chr11 122040730 122040736 NFIC JASPAR yes 41983931
chr11 122040732 122040736 H1TF2 TRANSFAC yes 41983932
chr11 122040732 122040736 NFE TRANSFAC yes 41983933
chr11 122040732 122040736 SRF TRANSFAC yes 41983934
Genes associated with rs12800234[chr11:122040732], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More