EnhancerDB
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  3. rs12801558[chr11:10662053]
Enhancers that have rs12801558[chr11:10662053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 10657898 10693746 enh13761
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs12801558[chr11:10662053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 10658957 10662178 TCF7L2 GTRD no Colon (HCT116) 21469669
chr11 10658957 10662178 TCF7L2 GTRD no Colon (HCT116) 107957499
chr11 10662044 10662058 SPI1 JASPAR yes 37328099
Genes associated with rs12801558[chr11:10662053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More