EnhancerDB
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  3. rs1281338[chr1:182112106]
Enhancers that have rs1281338[chr1:182112106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182109705 182120799 enh12436
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Ovary Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1281338[chr1:182112106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182111541 182112314 ZNF143 GTRD no Epithelial (MCF-7) 21357087
chr1 182111548 182112269 ZNF143 GTRD no Epithelial (MCF-7) 21357088
chr1 182111548 182112388 ZNF143 GTRD no Epithelial (MCF-7) 21357089
chr1 182111618 182112263 ZNF143 GTRD no Epithelial (MCF-7) 21357090
chr1 182111625 182112283 ZNF143 GTRD no Epithelial (MCF-7) 21357091
chr1 182111718 182112109 ZNF143 GTRD no Epithelial (MCF-7) 21357093
chr1 182111841 182112156 ZNF143 GTRD no Epithelial (MCF-7) 21357094
chr1 182112098 182112110 GRHL1 JASPAR yes 33595012
chr1 182112099 182112109 TFCP2 JASPAR yes 33595013
Genes associated with rs1281338[chr1:182112106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More