EnhancerDB
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  3. rs12825159[chr12:110542578]
Enhancers that have rs12825159[chr12:110542578]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110527065 110555975 enh2590
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12825159[chr12:110542578]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110542418 110542753 ZBTB33 GTRD no Lung (A549) 21572475
chr12 110542442 110542718 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572476
chr12 110542446 110542670 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572477
chr12 110542470 110542726 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572478
chr12 110542490 110544379 AR GTRD no Prostate (PC-3) 21572479
chr12 110542504 110542686 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572480
chr12 110542515 110542791 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572481
chr12 110542524 110542814 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572482
chr12 110542528 110542737 ZNF274 GTRD no Bone Marrow (K562) 21572483
chr12 110542536 110542796 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572484
chr12 110542548 110542808 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572485
chr12 110542566 110542906 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572486
chr12 110542567 110542903 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572487
chr12 110542571 110542582 NFIL3 JASPAR yes 123676134
chr12 110542571 110542585 ATF7 JASPAR yes 123676135
chr12 110542572 110542584 DBP JASPAR yes 123676136
chr12 110542572 110542584 HLF JASPAR yes 123676137
chr12 110542572 110542584 JDP2 JASPAR yes 123676138
chr12 110542572 110542584 TEF JASPAR yes 123676139
chr12 110542573 110542583 CEBPB JASPAR yes 123676140
chr12 110542573 110542583 CEBPD JASPAR yes 123676141
chr12 110542573 110542583 CEBPE JASPAR yes 123676142
chr12 110542573 110542583 CEBPG JASPAR yes 123676143
chr12 110542574 110542582 GMEB2 JASPAR yes 123676144
chr12 110542574 110542585 NFIL3 JASPAR yes 123676145
chr12 110542578 110542591 DUXA JASPAR yes 123676146
Genes associated with rs12825159[chr12:110542578], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More