EnhancerDB
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  3. rs1283169[chr12:52423746]
Enhancers that have rs1283169[chr12:52423746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr12 52423514 52423824 vista13433
VISTA
Transcript factors that have rs1283169[chr12:52423746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52423192 52423862 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032888
chr12 52423287 52423937 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545999
chr12 52423287 52423937 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032889
chr12 52423334 52423994 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546001
chr12 52423334 52423994 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032891
chr12 52423356 52423876 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032892
chr12 52423403 52423799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546002
chr12 52423403 52423799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032893
chr12 52423421 52423805 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546003
chr12 52423421 52423805 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032894
chr12 52423430 52423834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546004
chr12 52423430 52423834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032895
chr12 52423450 52423980 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546005
chr12 52423450 52423980 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032896
chr12 52423453 52423797 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032897
chr12 52423486 52423950 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546007
chr12 52423486 52423950 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032899
chr12 52423497 52424147 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546008
chr12 52423497 52424147 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032900
chr12 52423500 52423830 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546009
chr12 52423500 52423830 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032901
chr12 52423512 52423776 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032902
chr12 52423532 52425076 TCF7L2 GTRD no Colon (HCT116) 21546010
chr12 52423532 52425076 TCF7L2 GTRD no Colon (HCT116) 108032903
chr12 52423539 52423769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546011
chr12 52423539 52423769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032904
chr12 52423569 52423845 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546012
chr12 52423569 52423845 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032905
chr12 52423577 52423821 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546013
chr12 52423577 52423821 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032906
chr12 52423631 52423880 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546014
chr12 52423631 52423880 TFAP2C UCSC Txn Factor no Conserved 108032907
chr12 52423631 52423880 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032908
chr12 52423699 52423794 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032909
chr12 52423739 52423754 TFAP2C JASPAR yes 82405094
chr12 52423739 52423754 TFAP2C JASPAR yes 120914132
chr12 52423741 52423754 TFAP2A JASPAR yes 82405095
chr12 52423741 52423754 TFAP2B JASPAR yes 82405096
chr12 52423741 52423754 TFAP2C JASPAR yes 82405097
chr12 52423741 52423754 TFAP2A JASPAR yes 120914133
chr12 52423741 52423754 TFAP2B JASPAR yes 120914134
chr12 52423741 52423754 TFAP2C JASPAR yes 120914135
chr12 52423741 52423756 TFAP2A JASPAR yes 82405098
chr12 52423741 52423756 TFAP2C JASPAR yes 82405099
chr12 52423741 52423756 TFAP2A JASPAR yes 120914136
chr12 52423741 52423756 TFAP2C JASPAR yes 120914137
Genes associated with rs1283169[chr12:52423746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More