EnhancerDB
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  3. rs12880378[chr14:52829483]
Enhancers that have rs12880378[chr14:52829483]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 52825325 52839617 enh30880
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Lung Stomach Lung (PC-9) Muscle (Myoblast) Uterus Heart
Transcript factors that have rs12880378[chr14:52829483]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 52829475 52829485 POU6F2 JASPAR yes 115362885
chr14 52829476 52829486 GSX1 JASPAR yes 115362886
chr14 52829476 52829486 GSX2 JASPAR yes 115362887
chr14 52829476 52829486 HOXB3 JASPAR yes 115362888
chr14 52829476 52829487 HOXC13 JASPAR yes 115362889
chr14 52829476 52829487 HOXD12 JASPAR yes 115362890
chr14 52829477 52829485 NKX6-1 JASPAR yes 115362891
chr14 52829477 52829485 NKX6-2 JASPAR yes 115362892
chr14 52829477 52829487 HOXC10 JASPAR yes 115362893
chr14 52829477 52829487 HOXD13 JASPAR yes 115362894
chr14 52829479 52829483 YY1 TRANSFAC yes 115362895
Genes associated with rs12880378[chr14:52829483], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More