EnhancerDB
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  3. rs12912005[chr15:99983552]
Enhancers that have rs12912005[chr15:99983552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12912005[chr15:99983552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99983114 99983676 ZNF143 GTRD no Epithelial (MCF-7) 21682088
chr15 99983544 99983554 ID4 JASPAR yes 25874135
chr15 99983544 99983554 TCF3 JASPAR yes 25874136
chr15 99983544 99983554 TCF4 JASPAR yes 25874137
chr15 99983545 99983554 SNAI2 JASPAR yes 25874138
chr15 99983549 99983558 THAP1 JASPAR yes 25874140
chr15 99983550 99983562 TFAP2A JASPAR yes 25874141
chr15 99983550 99983562 TFAP2B JASPAR yes 25874142
chr15 99983550 99983562 TFAP2C JASPAR yes 25874143
chr15 99983550 99983565 TFAP2A JASPAR yes 25874144
chr15 99983550 99983565 TFAP2C JASPAR yes 25874145
chr15 99983550 99983567 RARA JASPAR yes 25874146
chr15 99983550 99983567 RXRA JASPAR yes 25874147
chr15 99983551 99983562 TFAP2A JASPAR yes 25874148
Genes associated with rs12912005[chr15:99983552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More