EnhancerDB
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  3. rs12923054[chr16:11202738]
Enhancers that have rs12923054[chr16:11202738]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11167765 11210995 enh3882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12923054[chr16:11202738]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11202727 11202741 PLAG1 JASPAR yes 9487899
chr16 11202734 11202739 SP1 TRANSFAC yes 9487900
chr16 11202735 11202740 SP1 TRANSFAC yes 9487901
chr16 11202738 11202743 SP1 TRANSFAC yes 9487902
Genes associated with rs12923054[chr16:11202738], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More