EnhancerDB
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  3. rs12925541[chr16:85432505]
Enhancers that have rs12925541[chr16:85432505]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85422125 85439595 enh4173
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs12925541[chr16:85432505]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85431867 85432652 ZNF143 GTRD no Epithelial (MCF-7) 21725059
chr16 85432495 85432507 FOXI1 JASPAR yes 12057067
chr16 85432496 85432508 FOXC2 JASPAR yes 12057068
chr16 85432499 85432514 TP53 JASPAR yes 12057069
chr16 85432500 85432515 TP53 JASPAR yes 12057070
chr16 85432502 85432512 SMAD3 JASPAR yes 12057071
Genes associated with rs12925541[chr16:85432505], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More