EnhancerDB
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  3. rs12929328[chr16:85183439]
Enhancers that have rs12929328[chr16:85183439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12929328[chr16:85183439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85182961 85183952 ZNF143 GTRD no Epithelial (MCF-7) 21720396
chr16 85183134 85183991 ZNF143 GTRD no Epithelial (MCF-7) 21720397
chr16 85183439 85183449 RELA JASPAR yes 12025636
chr16 85183439 85183450 NFKB1 JASPAR yes 12025637
Genes associated with rs12929328[chr16:85183439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More