EnhancerDB
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  3. rs12938078[chr17:55743277]
Enhancers that have rs12938078[chr17:55743277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55736279 55747115 enh4495
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12938078[chr17:55743277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55743264 55743279 RUNX2 JASPAR yes 54981276
chr17 55743274 55743290 GLIS1 JASPAR yes 54981277
chr17 55743275 55743289 GLIS3 JASPAR yes 54981278
chr17 55743275 55743295 PPARG JASPAR yes 54981279
Genes associated with rs12938078[chr17:55743277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More