EnhancerDB
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  3. rs12942555[chr17:78804085]
Enhancers that have rs12942555[chr17:78804085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78797749 78810595 enh4639
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
chr17 78803936 78804105 vista26349
VISTA
Transcript factors that have rs12942555[chr17:78804085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78803318 78804114 TCF7L2 GTRD no Colon (HCT116) 21797369
chr17 78803318 78804114 TCF7L2 GTRD no Colon (HCT116) 108307662
chr17 78803371 78804164 TCF7L2 GTRD no Colon (HCT116) 21797371
chr17 78803371 78804164 TCF7L2 GTRD no Colon (HCT116) 108307664
chr17 78803405 78804138 TCF7L2 GTRD no Colon (HCT116) 21797372
chr17 78803405 78804138 TCF7L2 GTRD no Colon (HCT116) 108307665
Genes associated with rs12942555[chr17:78804085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More