EnhancerDB
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  3. rs12943506[chr17:75228871]
Enhancers that have rs12943506[chr17:75228871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75227565 75234575 enh17396
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs12943506[chr17:75228871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75228808 75230171 ZBTB33 GTRD no Lung (A549) 108297625
chr17 75228859 75228877 IRF2 JASPAR yes 56056392
chr17 75228860 75228881 IRF1 JASPAR yes 56056393
chr17 75228862 75228877 PRDM1 JASPAR yes 56056394
chr17 75228862 75228877 STAT2 JASPAR yes 56056395
chr17 75228863 75228877 STAT1 JASPAR yes 56056396
chr17 75228864 75228876 IRF1 JASPAR yes 56056397
chr17 75228864 75228878 IRF7 JASPAR yes 56056398
chr17 75228864 75228878 IRF8 JASPAR yes 56056399
chr17 75228864 75228879 IRF9 JASPAR yes 56056400
chr17 75228871 75228886 STAT1 JASPAR yes 56056401
Genes associated with rs12943506[chr17:75228871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More