EnhancerDB
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  3. rs12943795[chr17:53522082]
Enhancers that have rs12943795[chr17:53522082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12943795[chr17:53522082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53521782 53522406 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772623
chr17 53521958 53522248 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772624
chr17 53521965 53522529 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772625
chr17 53521968 53522228 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772626
chr17 53521991 53522291 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772627
chr17 53521992 53522328 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772628
chr17 53522002 53522546 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772629
chr17 53522007 53522227 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772630
chr17 53522013 53522293 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772631
chr17 53522065 53522341 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772632
chr17 53522072 53522083 TFAP2B JASPAR yes 54851641
chr17 53522072 53522083 TFAP2C JASPAR yes 54851642
chr17 53522080 53522084 H4TF2 TRANSFAC yes 54851643
chr17 53522082 53522092 SP1 JASPAR yes 54851644
Genes associated with rs12943795[chr17:53522082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More