EnhancerDB
  1. Home
  2. SNP
  3. rs12944990[chr17:53531179]
Enhancers that have rs12944990[chr17:53531179]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12944990[chr17:53531179]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53531174 53531188 RORA JASPAR yes 54853138
Genes associated with rs12944990[chr17:53531179], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More