EnhancerDB
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  3. rs12945088[chr17:29397852]
Enhancers that have rs12945088[chr17:29397852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29392466 29404537 enh17094
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs12945088[chr17:29397852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29397841 29397854 NR2F1 JASPAR yes 53820971
Genes associated with rs12945088[chr17:29397852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 29421945 29709134 + NF1 ENSG00000196712.12 29421945 24093 Thyroid 0.00173264 15619