EnhancerDB
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  3. rs12945960[chr17:74790878]
Enhancers that have rs12945960[chr17:74790878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74776823 74795815 enh17393
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12945960[chr17:74790878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74790693 74791137 ZNF274 GTRD no Bone Marrow (K562) 21788965
chr17 74790750 74791067 ZNF274 GTRD no Bone Marrow (K562) 21788966
chr17 74790793 74792262 ZNF143 GTRD no Epithelial (MCF-7) 21788967
chr17 74790796 74792097 TCF7L2 GTRD no Colon (HCT116) 21788968
chr17 74790839 74792000 TCF7L2 GTRD no Colon (HCT116) 21788969
chr17 74790865 74792207 ZNF274 GTRD no Bone Marrow (K562) 21788970
chr17 74790872 74792590 TCF7L2 GTRD no Colon (HCT116) 21788971
Genes associated with rs12945960[chr17:74790878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More