EnhancerDB
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  3. rs12947198[chr17:78801227]
Enhancers that have rs12947198[chr17:78801227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78797749 78810595 enh4639
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs12947198[chr17:78801227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78801006 78801246 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108307659
chr17 78801100 78801836 P63 GTRD no Skin (Keratinocyte) 108307660
chr17 78801223 78801237 ZIC1 JASPAR yes 56283972
chr17 78801223 78801238 ZIC3 JASPAR yes 56283973
chr17 78801223 78801238 ZIC4 JASPAR yes 56283974
Genes associated with rs12947198[chr17:78801227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More