EnhancerDB
  1. Home
  2. SNP
  3. rs12949422[chr17:39820026]
Enhancers that have rs12949422[chr17:39820026]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs12949422[chr17:39820026]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39820015 39820026 ESRRA JASPAR yes 54270123
chr17 39820015 39820026 ESRRB JASPAR yes 54270124
chr17 39820017 39820027 RORA JASPAR yes 54270126
Genes associated with rs12949422[chr17:39820026], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More