EnhancerDB
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  3. rs12966139[chr18:55901998]
Enhancers that have rs12966139[chr18:55901998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55895930 55912515 enh17738
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Heart
Transcript factors that have rs12966139[chr18:55901998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55901993 55901999 LEF1 TRANSFAC yes 110930602
chr18 55901993 55901999 SOX10 JASPAR yes 110930603
chr18 55901994 55902006 FOXC2 JASPAR yes 110930604
Genes associated with rs12966139[chr18:55901998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More