EnhancerDB
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  3. rs12972037[chr19:2504474]
Enhancers that have rs12972037[chr19:2504474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12972037[chr19:2504474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2503012 2504843 TCF7L2 GTRD no Colon (HCT116) 108360665
chr19 2503215 2504748 ZNF274 GTRD no Cervix (HeLa-S3) 21835775
chr19 2503215 2504748 ZNF274 GTRD no Cervix (HeLa-S3) 108360668
chr19 2503230 2504737 ZNF143 GTRD no Epithelial (MCF-7) 21835776
chr19 2503230 2504737 ZNF143 GTRD no Epithelial (MCF-7) 108360669
chr19 2503312 2504522 ZNF274 GTRD no Cervix (HeLa-S3) 21835780
chr19 2503312 2504522 ZNF274 GTRD no Cervix (HeLa-S3) 108360677
chr19 2503348 2504493 ZNF274 GTRD no Blood (GM12878) 108360683
chr19 2503360 2504532 TCF7L2 GTRD no Colon (HCT116) 108360684
chr19 2503577 2504659 TCF7L2 GTRD no Colon (HCT116) 108360721
chr19 2504454 2504475 IRF1 JASPAR yes 112067630
chr19 2504458 2504479 IRF1 JASPAR yes 112067632
chr19 2504459 2504474 FOXP1 JASPAR yes 112067633
chr19 2504460 2504475 FOXP1 JASPAR yes 112067634
chr19 2504461 2504476 FOXP1 JASPAR yes 112067635
chr19 2504462 2504477 FOXP1 JASPAR yes 112067636
chr19 2504474 2504487 POU3F3 JASPAR yes 112067637
Genes associated with rs12972037[chr19:2504474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More