EnhancerDB
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Enhancers that have rs12972273[chr19:2491364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12972273[chr19:2491364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2490428 2492348 ZNF143 GTRD no Epithelial (MCF-7) 21835544
chr19 2490457 2492100 AR GTRD no Prostate (PC-3) 21835545
chr19 2490539 2491965 ZNF274 GTRD no Cervix (HeLa-S3) 21835546
chr19 2490555 2491954 ZNF274 GTRD no Cervix (HeLa-S3) 21835547
chr19 2490559 2492025 ZNF274 GTRD no Cervix (HeLa-S3) 21835548
chr19 2490573 2492184 ZNF274 GTRD no Cervix (HeLa-S3) 21835549
chr19 2490587 2491751 ZNF274 GTRD no Bone Marrow (K562) 21835550
chr19 2490661 2492021 ZNF274 GTRD no Cervix (HeLa-S3) 21835552
chr19 2490671 2492011 ZNF274 GTRD no Cervix (HeLa-S3) 21835553
chr19 2490734 2492040 ZNF274 GTRD no Cervix (HeLa-S3) 21835556
chr19 2490841 2491517 ZNF274 GTRD no Liver (HepG2) 21835558
chr19 2490841 2491959 ZNF143 GTRD no Epithelial (MCF-7) 21835559
chr19 2490846 2491796 ZNF143 GTRD no Epithelial (MCF-7) 21835560
chr19 2490850 2491832 ZNF143 GTRD no Epithelial (MCF-7) 21835561
chr19 2490863 2492083 ZNF143 GTRD no Epithelial (MCF-7) 21835562
chr19 2490866 2491762 ZNF274 GTRD no Cervix (HeLa-S3) 21835563
chr19 2490875 2491865 ZNF143 GTRD no Epithelial (MCF-7) 21835564
chr19 2490888 2491978 ZNF143 GTRD no Epithelial (MCF-7) 21835565
chr19 2490894 2491842 ZNF143 GTRD no Epithelial (MCF-7) 21835566
chr19 2490913 2491567 ZNF143 GTRD no Epithelial (MCF-7) 21835567
chr19 2490913 2492002 ZNF274 GTRD no Cervix (HeLa-S3) 21835568
chr19 2490921 2492017 ERG GTRD no Prostate (RWPE1) 21835569
chr19 2490954 2491867 ZNF143 GTRD no Epithelial (MCF-7) 21835570
chr19 2490956 2491934 MYOD GTRD no Muscle (Myoblast) 21835571
chr19 2490970 2491804 ZNF143 GTRD no Epithelial (MCF-7) 21835572
chr19 2490979 2491893 ZNF274 GTRD no Liver (HepG2) 21835573
chr19 2490989 2491949 ZNF274 GTRD no Cervix (HeLa-S3) 21835574
chr19 2490992 2491403 ZNF274 GTRD no Liver (HepG2) 21835575
chr19 2491003 2491802 ZNF274 GTRD no Cervix (HeLa-S3) 21835576
chr19 2491003 2491956 ZNF143 GTRD no Epithelial (MCF-7) 21835577
chr19 2491010 2492020 ZNF143 GTRD no Epithelial (MCF-7) 21835578
chr19 2491021 2492019 ZNF143 GTRD no Epithelial (MCF-7) 21835579
chr19 2491025 2491911 ZNF274 GTRD no Cervix (HeLa-S3) 21835580
chr19 2491025 2492165 ZNF143 GTRD no Epithelial (MCF-7) 21835581
chr19 2491028 2491902 ZNF274 GTRD no Cervix (HeLa-S3) 21835582
chr19 2491030 2491374 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835583
chr19 2491030 2491540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835584
chr19 2491036 2491512 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835585
chr19 2491036 2491911 ZNF143 GTRD no Epithelial (MCF-7) 21835586
chr19 2491041 2492147 ZNF143 GTRD no Epithelial (MCF-7) 21835588
chr19 2491041 2492164 ZNF143 GTRD no Epithelial (MCF-7) 21835589
chr19 2491051 2491531 ZNF274 GTRD no Bone Marrow (K562) 21835590
chr19 2491058 2491588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835591
chr19 2491061 2491902 ZNF143 GTRD no Epithelial (MCF-7) 21835592
chr19 2491065 2491581 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835593
chr19 2491071 2491451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835594
chr19 2491072 2491576 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835595
chr19 2491087 2491978 ZNF143 GTRD no Epithelial (MCF-7) 21835596
chr19 2491088 2491854 ZNF274 GTRD no Cervix (HeLa-S3) 21835597
chr19 2491094 2491710 ZNF143 GTRD no Epithelial (MCF-7) 21835598
chr19 2491094 2491939 ZNF143 GTRD no Epithelial (MCF-7) 21835599
chr19 2491097 2491706 ZNF143 GTRD no Epithelial (MCF-7) 21835600
chr19 2491102 2492015 ZNF143 GTRD no Epithelial (MCF-7) 21835601
chr19 2491104 2491451 ZNF143 GTRD no Epithelial (MCF-7) 21835602
chr19 2491110 2491632 ZNF143 GTRD no Epithelial (MCF-7) 21835603
chr19 2491116 2491868 ZNF274 GTRD no Cervix (HeLa-S3) 21835604
chr19 2491125 2491410 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21835605
chr19 2491125 2491984 ZNF274 GTRD no Cervix (HeLa-S3) 21835606
chr19 2491140 2491800 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835607
chr19 2491147 2491803 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21835608
chr19 2491148 2491756 ZNF143 GTRD no Epithelial (MCF-7) 21835609
chr19 2491156 2491938 ZNF274 GTRD no Cervix (HeLa-S3) 21835610
chr19 2491171 2491431 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835611
chr19 2491196 2491904 ZNF143 GTRD no Epithelial (MCF-7) 21835612
chr19 2491215 2491801 ZNF274 GTRD no Bone Marrow (K562) 21835613
chr19 2491245 2491762 ZNF274 GTRD no Bone Marrow (K562) 21835614
chr19 2491247 2491971 ZNF274 GTRD no Liver (HepG2) 21835615
chr19 2491266 2491602 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21835616
chr19 2491267 2491783 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835617
chr19 2491309 2491669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835618
chr19 2491309 2492011 ZNF274 GTRD no Liver (HepG2) 21835619
chr19 2491312 2491708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835620
chr19 2491315 2491625 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21835621
chr19 2491329 2491861 ZNF274 GTRD no Cervix (HeLa-S3) 21835622
chr19 2491337 2491647 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21835623
chr19 2491350 2491640 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835624
Genes associated with rs12972273[chr19:2491364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More