EnhancerDB
  1. Home
  2. SNP
  3. rs12978023[chr19:3076224]
Enhancers that have rs12978023[chr19:3076224]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3068462 3082555 enh17858
Bone Marrow (K562) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs12978023[chr19:3076224]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3074862 3076793 TCF7L2 GTRD no Colon (HCT116) 21838558
chr19 3075019 3076387 ZNF274 GTRD no Bone Marrow (K562) 21838559
chr19 3075030 3076749 TCF7L2 GTRD no Colon (HCT116) 21838560
chr19 3075150 3076429 TCF7L2 GTRD no Colon (HCT116) 21838561
chr19 3075290 3076451 ZNF274 GTRD no Bone Marrow (K562) 21838562
chr19 3075316 3076725 ZNF274 GTRD no Bone Marrow (K562) 21838563
chr19 3075360 3076489 TCF7L2 GTRD no Colon (HCT116) 21838564
chr19 3075410 3076548 ZNF274 GTRD no Bone Marrow (K562) 21838565
chr19 3075471 3076505 ZNF274 GTRD no Bone Marrow (K562) 21838566
chr19 3075484 3076459 ZNF274 GTRD no Bone Marrow (K562) 21838567
chr19 3075553 3076439 ZNF274 GTRD no Bone Marrow (K562) 21838568
chr19 3075562 3076354 ZNF274 GTRD no Bone Marrow (K562) 21838569
chr19 3075565 3076303 ZNF274 GTRD no Bone Marrow (K562) 21838570
chr19 3075567 3076382 ZNF274 GTRD no Bone Marrow (K562) 21838571
chr19 3075594 3076565 TCF7L2 GTRD no Colon (HCT116) 21838572
chr19 3075606 3076474 ZNF274 GTRD no Bone Marrow (K562) 21838573
chr19 3075619 3076445 ZNF274 GTRD no Bone Marrow (K562) 21838574
chr19 3075638 3076740 ZNF274 GTRD no Bone Marrow (K562) 21838575
chr19 3075638 3076890 ZNF274 GTRD no Bone Marrow (K562) 21838576
chr19 3075665 3076654 TCF7L2 GTRD no Colon (HCT116) 21838577
chr19 3075684 3076585 ZNF274 GTRD no Bone Marrow (K562) 21838579
chr19 3075697 3076637 ZNF274 GTRD no Bone Marrow (K562) 21838580
chr19 3075708 3076515 TCF7L2 GTRD no Colon (HCT116) 21838581
chr19 3075710 3076357 ZNF274 GTRD no Bone Marrow (K562) 21838582
chr19 3075734 3076385 ZNF274 GTRD no Bone Marrow (K562) 21838583
chr19 3075736 3076385 ZNF274 GTRD no Bone Marrow (K562) 21838584
chr19 3075743 3076622 TCF7L2 GTRD no Colon (HCT116) 21838585
chr19 3075753 3076366 ZNF274 GTRD no Bone Marrow (K562) 21838586
chr19 3075758 3076684 ZNF274 GTRD no Bone Marrow (K562) 21838587
chr19 3075758 3076979 ZNF274 GTRD no Bone Marrow (K562) 21838588
chr19 3075759 3076547 ZNF274 GTRD no Bone Marrow (K562) 21838589
chr19 3075761 3076553 TCF7L2 GTRD no Colon (HCT116) 21838590
chr19 3075772 3076452 ZNF274 GTRD no Bone Marrow (K562) 21838591
chr19 3075786 3076341 ZNF274 GTRD no Bone Marrow (K562) 21838593
chr19 3075800 3076296 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838594
chr19 3075802 3076403 ZNF274 GTRD no Bone Marrow (K562) 21838595
chr19 3075808 3076515 ZNF274 GTRD no Bone Marrow (K562) 21838596
chr19 3075849 3076344 ZNF274 GTRD no Bone Marrow (K562) 21838598
chr19 3075858 3076492 TCF7L2 GTRD no Colon (HCT116) 21838599
chr19 3075869 3076325 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838600
chr19 3075876 3076549 ZNF274 GTRD no Bone Marrow (K562) 21838601
chr19 3075891 3076355 ZNF274 GTRD no Bone Marrow (K562) 21838602
chr19 3075894 3076453 ZNF274 GTRD no Bone Marrow (K562) 21838603
chr19 3075895 3076439 ZNF274 GTRD no Bone Marrow (K562) 21838604
chr19 3075896 3076396 ZNF274 GTRD no Bone Marrow (K562) 21838605
chr19 3075898 3076336 ZNF274 GTRD no Bone Marrow (K562) 21838606
chr19 3075898 3076436 ZNF274 GTRD no Bone Marrow (K562) 21838607
chr19 3075900 3076437 ZNF274 GTRD no Bone Marrow (K562) 21838608
chr19 3075902 3076282 ZNF274 GTRD no Bone Marrow (K562) 21838609
chr19 3075912 3076379 ZNF274 GTRD no Bone Marrow (K562) 21838610
chr19 3075912 3076414 ZNF274 GTRD no Bone Marrow (K562) 21838611
chr19 3075917 3076354 TCF7L2 GTRD no Colon (HCT116) 21838612
chr19 3075918 3076360 ZNF274 GTRD no Bone Marrow (K562) 21838613
chr19 3075920 3076311 ZNF274 GTRD no Bone Marrow (K562) 21838614
chr19 3075925 3076335 ZNF274 GTRD no Bone Marrow (K562) 21838615
chr19 3075936 3076300 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838616
chr19 3075937 3076277 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838617
chr19 3075938 3076326 ZNF274 GTRD no Bone Marrow (K562) 21838618
chr19 3075941 3076277 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21838619
chr19 3075943 3076313 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838620
chr19 3075948 3076241 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838621
chr19 3075948 3076341 ZNF274 GTRD no Bone Marrow (K562) 21838622
chr19 3075951 3076257 TCF7L2 GTRD no Colon (HCT116) 21838623
chr19 3075966 3076296 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838624
chr19 3075978 3076467 TCF7L2 GTRD no Colon (HCT116) 21838626
chr19 3075980 3076290 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838627
chr19 3075983 3076253 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21838628
chr19 3075983 3076259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838629
chr19 3075990 3076226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838630
chr19 3075995 3076305 ZNF274 GTRD no Bone Marrow (K562) 21838631
chr19 3075998 3076288 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838632
chr19 3075999 3076279 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838633
chr19 3076007 3076277 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838634
chr19 3076032 3076244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838635
chr19 3076035 3076352 ZNF274 GTRD no Bone Marrow (K562) 21838636
chr19 3076046 3076240 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21838638
chr19 3076049 3076314 TCF7L2 GTRD no Colon (HCT116) 21838639
chr19 3076081 3076302 ZNF274 GTRD no Bone Marrow (K562) 21838641
chr19 3076220 3076234 GLIS2 JASPAR yes 112109501
Genes associated with rs12978023[chr19:3076224], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More