EnhancerDB
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  3. rs12978179[chr19:2172378]
Enhancers that have rs12978179[chr19:2172378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2165405 2178635 enh32873
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Pancreas Blood (T-cell) Heart
Transcript factors that have rs12978179[chr19:2172378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2169827 2172411 ZNF274 GTRD no Liver (HepG2) 21835113
chr19 2169827 2172411 ZNF274 GTRD no Liver (HepG2) 108358921
chr19 2169827 2172411 ZNF274 GTRD no Liver (HepG2) 108358922
chr19 2169956 2172392 ZNF274 GTRD no Bone Marrow (K562) 21835114
chr19 2169956 2172392 ZNF274 GTRD no Bone Marrow (K562) 108358925
chr19 2169956 2172392 ZNF274 GTRD no Bone Marrow (K562) 108358926
chr19 2170094 2172420 ZNF274 GTRD no Blood (GM12878) 108358937
chr19 2170094 2172420 ZNF274 GTRD no Blood (GM12878) 108358938
chr19 2170173 2172381 ZNF274 GTRD no Blood (GM12878) 108358945
chr19 2170173 2172381 ZNF274 GTRD no Blood (GM12878) 108358946
chr19 2170881 2172401 ZNF274 GTRD no Liver (HepG2) 21835120
chr19 2170881 2172401 ZNF274 GTRD no Liver (HepG2) 108358976
chr19 2170881 2172401 ZNF274 GTRD no Liver (HepG2) 108358977
chr19 2171201 2172505 ZNF274 GTRD no Bone Marrow (K562) 21835150
chr19 2171201 2172505 ZNF274 GTRD no Bone Marrow (K562) 108359123
chr19 2171201 2172505 ZNF274 GTRD no Bone Marrow (K562) 108359124
chr19 2171213 2172392 ZNF274 GTRD no Bone Marrow (K562) 21835152
chr19 2171213 2172392 ZNF274 GTRD no Bone Marrow (K562) 108359134
chr19 2171213 2172392 ZNF274 GTRD no Bone Marrow (K562) 108359135
chr19 2171637 2172380 ZNF274 GTRD no Bone Marrow (K562) 21835202
chr19 2171637 2172380 ZNF274 GTRD no Bone Marrow (K562) 108359336
chr19 2172377 2172390 NFKB1 JASPAR yes 112053645
chr19 2172377 2172390 NFKB2 JASPAR yes 112053646
Genes associated with rs12978179[chr19:2172378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More