EnhancerDB
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  3. rs12978425[chr19:7486381]
Enhancers that have rs12978425[chr19:7486381]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7469445 7495915 enh17893
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs12978425[chr19:7486381]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7486375 7486388 SMAD2 JASPAR yes 112326780
chr19 7486378 7486388 TBR1 JASPAR yes 112326781
chr19 7486379 7486389 TBX21 JASPAR yes 112326782
chr19 7486380 7486388 MGA JASPAR yes 112326783
chr19 7486380 7486388 TBX15 JASPAR yes 112326784
chr19 7486380 7486388 TBX1 JASPAR yes 112326785
chr19 7486380 7486388 TBX4 JASPAR yes 112326786
chr19 7486380 7486388 TBX5 JASPAR yes 112326787
chr19 7486380 7486389 ZEB1 JASPAR yes 112326788
chr19 7486380 7486392 PKNOX1 JASPAR yes 112326789
chr19 7486380 7486392 TGIF1 JASPAR yes 112326790
chr19 7486380 7486393 ZBTB18 JASPAR yes 112326791
chr19 7486381 7486391 FIGLA JASPAR yes 112326792
chr19 7486381 7486391 ID4 JASPAR yes 112326793
chr19 7486381 7486391 TCF3 JASPAR yes 112326794
chr19 7486381 7486391 TCF4 JASPAR yes 112326795
Genes associated with rs12978425[chr19:7486381], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More