EnhancerDB
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  3. rs12978430[chr19:2504667]
Enhancers that have rs12978430[chr19:2504667]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12978430[chr19:2504667]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2503012 2504843 TCF7L2 GTRD no Colon (HCT116) 108360665
chr19 2503215 2504748 ZNF274 GTRD no Cervix (HeLa-S3) 21835775
chr19 2503215 2504748 ZNF274 GTRD no Cervix (HeLa-S3) 108360668
chr19 2503230 2504737 ZNF143 GTRD no Epithelial (MCF-7) 21835776
chr19 2503230 2504737 ZNF143 GTRD no Epithelial (MCF-7) 108360669
chr19 2504656 2504671 RFX5 JASPAR yes 112067667
Genes associated with rs12978430[chr19:2504667], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More