EnhancerDB
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  3. rs12978633[chr19:1182560]
Enhancers that have rs12978633[chr19:1182560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1174025 1184042 enh17839
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Esophagus Stomach Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs12978633[chr19:1182560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1181252 1182606 ZNF143 GTRD no Epithelial (MCF-7) 21831620
chr19 1181274 1182573 ZNF143 GTRD no Epithelial (MCF-7) 21831625
chr19 1181280 1182591 ZNF143 GTRD no Epithelial (MCF-7) 21831626
chr19 1181335 1182573 ZNF143 GTRD no Epithelial (MCF-7) 21831631
chr19 1181356 1182659 ZNF143 GTRD no Epithelial (MCF-7) 21831635
chr19 1181397 1184409 ZBTB33 GTRD no Lung (A549) 108350838
chr19 1181509 1182584 ZNF143 GTRD no Epithelial (MCF-7) 21831658
chr19 1181577 1182705 ZNF143 GTRD no Epithelial (MCF-7) 21831670
chr19 1182515 1184267 ZBTB33 GTRD no Lung (A549) 108350839
chr19 1182520 1184804 ZBTB33 GTRD no Lung (A549) 108350840
chr19 1182542 1182562 RREB1 JASPAR yes 111999436
chr19 1182547 1184464 ZBTB33 GTRD no Lung (A549) 108350841
chr19 1182556 1182561 SP1 TRANSFAC yes 111999437
Genes associated with rs12978633[chr19:1182560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 531714 542097 + CDC34 ENSG00000099804.4 531714 640463 Esophagus 0.150828 16705